Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3304 domain-containing protein | FCU55_25780 | Not Available | Positive | 5125482 - 5126009 | 19559.6 |
| duf2235 domain-containing protein | FCU55_25785 | Not Available | Positive | 5126006 - 5127874 | 70278.8 |
| type vi secretion system tip protein vgrg | FCU55_25790 | Not Available | Positive | 5127980 - 5130493 | 92774.5 |
| lytic transglycosylase domain-containing protein | FCU55_25795 | Not Available | Positive | 5130515 - 5131117 | 23310.9 |
| hypothetical protein | FCU55_25800 | Not Available | Positive | 5131220 - 5131669 | 16763.1 |
| hypothetical protein | FCU55_25805 | Not Available | Positive | 5131747 - 5132961 | 44697.8 |
| duf4432 domain-containing protein | FCU55_25815 | Not Available | Negative | 5134981 - 5135994 | 38193.7 |
| l-fucose:h+ symporter permease | FCU55_25820 | Not Available | Negative | 5136006 - 5137322 | 48509.2 |
| ribokinase | FCU55_25825 | Not Available | Negative | 5137350 - 5138270 | 33223.8 |
| deor family transcriptional regulator | FCU55_25830 | Not Available | Positive | 5138576 - 5139358 | 29041.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





