Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU55_25620 | Not Available | Positive | 5098197 - 5098310 | 4374.52 |
| is3 family transposase | FCU55_25625 | Not Available | Positive | 5098401 - 5099527 | 43486.8 |
| hypothetical protein | FCU55_25630 | Not Available | Negative | 5099496 - 5099711 | 8222.09 |
| hypothetical protein | FCU55_25635 | Not Available | Negative | 5099825 - 5100112 | 10817.2 |
| pilus assembly protein | FCU55_25640 | Not Available | Negative | 5100178 - 5100387 | 7791.37 |
| hypothetical protein | FCU55_25645 | Not Available | Negative | 5100812 - 5101069 | 9596.5 |
| abc transporter atp-binding protein | FCU55_25650 | Not Available | Negative | 5101123 - 5101890 | 27658.9 |
| iron abc transporter permease | FCU55_25655 | Not Available | Negative | 5101887 - 5102945 | 37564.4 |
| abc transporter substrate-binding protein | FCU55_25660 | Not Available | Negative | 5102964 - 5103953 | 36749.4 |
| tonb-dependent receptor | FCU55_25665 | Not Available | Negative | 5103964 - 5106129 | 78477.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





