Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system toxin ccdb | FCU55_25245 | Not Available | Negative | 5049091 - 5049396 | 11693.2 |
| type ii toxin-antitoxin system antitoxin ccda | FCU55_25250 | Not Available | Negative | 5049398 - 5049616 | 8354.72 |
| hypothetical protein | FCU55_25255 | Not Available | Positive | 5049618 - 5049896 | 10482.5 |
| abrb/maze/spovt family dna-binding domain-containing protein | FCU55_25260 | Not Available | Positive | 5050176 - 5050406 | 8748.36 |
| type ii toxin-antitoxin system vapc family toxin | FCU55_25265 | Not Available | Positive | 5050403 - 5050819 | 15265.6 |
| atp-dependent endonuclease | FCU55_25270 | Not Available | Positive | 5050894 - 5052459 | 59483.6 |
| dna helicase uvrd | FCU55_25275 | Not Available | Positive | 5052444 - 5053466 | 39615.6 |
| hypothetical protein | FCU55_25280 | Not Available | Negative | 5053720 - 5053778 | 2206.66 |
| trmb family transcriptional regulator | FCU55_25285 | Not Available | Negative | 5053907 - 5054104 | 7441.02 |
| duf262 domain-containing protein | FCU55_25290 | Not Available | Positive | 5054358 - 5055515 | 44684.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





