Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU55_24740 | Not Available | Negative | 4963139 - 4963345 | 7939.39 |
| hypothetical protein | FCU55_24745 | Not Available | Negative | 4963797 - 4964165 | 12596.6 |
| hypothetical protein | FCU55_24750 | Not Available | Positive | 4964213 - 4964422 | 7599.14 |
| type 1 fimbrial protein | FCU55_24755 | Not Available | Negative | 4964441 - 4965520 | 38559.1 |
| fimbrial biogenesis outer membrane usher protein | FCU55_24760 | Not Available | Negative | 4965517 - 4968051 | 92942.7 |
| molecular chaperone | FCU55_24765 | Not Available | Negative | 4968059 - 4968784 | 27088.4 |
| f17 fimbrial protein | FCU55_24770 | Not Available | Negative | 4968849 - 4969397 | 18936.2 |
| doxx family protein | FCU55_24775 | Not Available | Negative | 4969973 - 4970371 | 14228.2 |
| histidine kinase | FCU55_24780 | Not Available | Negative | 4970398 - 4971615 | 42511.8 |
| is66 family transposase | FCU55_24795 | Not Available | Negative | 4972294 - 4973865 | 58731.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





