Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone | FCU55_24685 | Not Available | Negative | 4954932 - 4955666 | 27420.1 |
| papc/fimd family outer membrane usher protein | FCU55_24690 | Not Available | Negative | 4955737 - 4958247 | 91575.1 |
| type 1 fimbrial protein | FCU55_24695 | Not Available | Negative | 4958306 - 4958866 | 20830.6 |
| type 1 fimbrial protein | FCU55_24700 | Not Available | Negative | 4958956 - 4959519 | 18961.3 |
| major pilus subunit operon regulatory protein papb | FCU55_24705 | Not Available | Negative | 4959727 - 4960041 | 11696.2 |
| major pilus subunit operon regulatory protein | FCU55_24710 | Not Available | Positive | 4960446 - 4960679 | 8855.65 |
| hypothetical protein | FCU55_24715 | Not Available | Negative | 4960785 - 4961015 | 8595.67 |
| hypothetical protein | FCU55_24720 | Not Available | Positive | 4961182 - 4961550 | 13361.6 |
| hypothetical protein | FCU55_24725 | Not Available | Positive | 4961689 - 4961898 | 8032.33 |
| luxr family transcriptional regulator | FCU55_24735 | Not Available | Negative | 4962600 - 4963076 | 18336.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





