Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU55_24325 | Not Available | Negative | 4902703 - 4903104 | 15549.2 |
| inovirus gp2 family protein | FCU55_24330 | Not Available | Negative | 4903364 - 4903933 | 21842.2 |
| hypothetical protein | FCU55_24335 | Not Available | Positive | 4904133 - 4904330 | 7249.25 |
| hypothetical protein | FCU55_24340 | Not Available | Negative | 4904443 - 4904643 | 7657.98 |
| hemolysin activation protein | FCU55_24345 | Not Available | Negative | 4904663 - 4904812 | 5700.86 |
| hypothetical protein | FCU55_24350 | Not Available | Positive | 4905383 - 4905589 | 7856.57 |
| helix-turn-helix domain-containing protein | FCU55_24355 | Not Available | Positive | 4905586 - 4905792 | 7866.61 |
| hypothetical protein | FCU55_24360 | Not Available | Positive | 4905888 - 4906490 | 23653.4 |
| hypothetical protein | FCU55_24365 | Not Available | Negative | 4906396 - 4906593 | 7162.34 |
| hypothetical protein | FCU55_24370 | Not Available | Positive | 4906662 - 4906859 | 7139.53 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





