Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphomethylpyrimidine synthase thic | FCU55_24165 | Not Available | Positive | 4870015 - 4871910 | 70797.4 |
| thiamine phosphate synthase | FCU55_24170 | Not Available | Positive | 4871910 - 4872545 | 23028.7 |
| thiazole biosynthesis adenylyltransferase thif | FCU55_24175 | Not Available | Positive | 4872538 - 4873293 | 27107.7 |
| sulfur carrier protein this | FCU55_24180 | Not Available | Positive | 4873277 - 4873477 | 7408.92 |
| thiazole synthase | FCU55_24185 | Not Available | Positive | 4873479 - 4874249 | 26838.6 |
| 2-iminoacetate synthase thih | FCU55_24190 | Not Available | Positive | 4874246 - 4875379 | 43190.4 |
| dna-directed rna polymerase subunit beta' | FCU55_24195 | Not Available | Negative | 4875621 - 4879844 | 155183.0 |
| dna-directed rna polymerase subunit beta | FCU55_24200 | Not Available | Negative | 4879921 - 4883949 | 150641.0 |
| 50s ribosomal protein l7/l12 | FCU55_24205 | Not Available | Negative | 4884269 - 4884634 | 12295.8 |
| 50s ribosomal protein l10 | FCU55_24210 | Not Available | Negative | 4884701 - 4885198 | 17712.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





