Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fumarate reductase subunit frdd | FCU55_23520 | Not Available | Positive | 4738995 - 4739354 | 13107.8 |
| blaec family class c beta-lactamase | FCU55_23525 | Not Available | Positive | 4739417 - 4740550 | 41686.1 |
| lipocalin family protein | FCU55_23530 | Not Available | Positive | 4740639 - 4741172 | 19924.7 |
| quaternary ammonium compound-resistance protein suge | FCU55_23535 | Not Available | Negative | 4741169 - 4741486 | 10901.0 |
| lipoprotein toxin entericidin b | FCU55_23540 | Not Available | Negative | 4741662 - 4741808 | 4809.81 |
| entericidin a | FCU55_23545 | Not Available | Negative | 4741919 - 4742044 | 4359.48 |
| elongation factor p | FCU55_23550 | Not Available | Negative | 4742096 - 4742662 | 20592.4 |
| ef-p beta-lysylation protein epmb | FCU55_23555 | Not Available | Positive | 4742704 - 4743732 | 38700.8 |
| hypothetical protein | FCU55_23560 | Not Available | Positive | 4743967 - 4744836 | 32926.8 |
| duf4156 domain-containing protein | FCU55_23565 | Not Available | Negative | 4744886 - 4745239 | 11959.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





