Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cu(+)/ag(+) efflux rnd transporter permease subunit sila | FCU55_23370 | Not Available | Negative | 4707981 - 4711127 | 114804.0 |
| cu(+)/ag(+) efflux rnd transporter periplasmic adaptor subunit silb | FCU55_23375 | Not Available | Negative | 4711138 - 4712430 | 47777.5 |
| copper abc transporter substrate-binding protein | FCU55_23380 | Not Available | Negative | 4712544 - 4712897 | 12636.2 |
| cu(+)/ag(+) efflux rnd transporter outer membrane channel silc | FCU55_23385 | Not Available | Negative | 4712925 - 4714310 | 51098.7 |
| outer-membrane efflux lipo domain protein | FCU55_23390 | Not Available | Negative | 4714373 - 4714498 | 4803.88 |
| copper/silver response regulator transcription factor silr | FCU55_23395 | Not Available | Positive | 4714500 - 4715180 | 25281.9 |
| copper/silver sensor histidine kinase sils | FCU55_23400 | Not Available | Positive | 4715173 - 4716648 | 55846.5 |
| silver-binding protein sile | FCU55_23405 | Not Available | Positive | 4716899 - 4717330 | 15299.1 |
| duf305 domain-containing protein | FCU55_23410 | Not Available | Positive | 4717474 - 4717824 | 13055.0 |
| hnh endonuclease | FCU55_23415 | Not Available | Negative | 4718212 - 4719120 | 34711.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





