Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr family transcriptional regulator | FCU55_23315 | Not Available | Negative | 4696062 - 4696739 | 24374.9 |
| tetracycline efflux mfs transporter tet(a) | FCU55_23320 | Not Available | Positive | 4696818 - 4698017 | 42273.6 |
| eama family transporter | FCU55_23325 | Not Available | Negative | 4698049 - 4698933 | 31150.6 |
| cysteine hydrolase | FCU55_23330 | Not Available | Negative | 4699071 - 4699463 | 14133.7 |
| copper resistance system multicopper oxidase | FCU55_23340 | Not Available | Negative | 4701280 - 4702911 | 59903.4 |
| copper resistance protein | FCU55_23345 | Not Available | Positive | 4703146 - 4703595 | 16229.7 |
| peptidase m23 | FCU55_23350 | Not Available | Positive | 4703870 - 4704607 | 27053.2 |
| duf2933 domain-containing protein | FCU55_23355 | Not Available | Negative | 4704641 - 4704838 | 7255.74 |
| ag(+)-translocating p-type atpase silp | FCU55_23360 | Not Available | Negative | 4704879 - 4707356 | 88315.5 |
| hypothetical protein | FCU55_23365 | Not Available | Negative | 4707454 - 4707894 | 15490.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





