Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| monooxygenase | FCU55_23255 | Not Available | Positive | 4684385 - 4684690 | 11304.5 |
| fad-nad(p)-binding protein | FCU55_23260 | Not Available | Positive | 4684816 - 4686420 | 60685.3 |
| hypothetical protein | FCU55_23265 | Not Available | Negative | 4686432 - 4687244 | 29342.5 |
| thiosulfate reductase cytochrome b subunit | FCU55_23270 | Not Available | Negative | 4687248 - 4688033 | 29535.4 |
| 4fe-4s dicluster domain-containing protein | FCU55_23275 | Not Available | Negative | 4688030 - 4688698 | 25058.0 |
| ydhw family putative oxidoreductase system protein | FCU55_23280 | Not Available | Negative | 4688762 - 4689409 | 24455.8 |
| abc-f family atp-binding cassette domain-containing protein | FCU55_23295 | Not Available | Negative | 4690157 - 4691728 | 56886.5 |
| recombinase family protein | FCU55_23300 | Not Available | Positive | 4692200 - 4692760 | 21288.5 |
| tn3-like element tnas1 family transposase | FCU55_23305 | Not Available | Positive | 4692764 - 4695730 | 111673.0 |
| relaxase | FCU55_23310 | Not Available | Positive | 4695788 - 4696030 | 8907.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





