Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator dsdc | FCU55_22745 | Not Available | Positive | 4608702 - 4609569 | 32715.9 |
| elongation factor tu | FCU55_22750 | Not Available | Positive | 4609570 - 4609791 | 7984.86 |
| bifunctional chitinase/lysozyme | FCU55_22755 | Not Available | Positive | 4610083 - 4612785 | 97521.8 |
| bacterioferritin-associated ferredoxin | FCU55_22760 | Not Available | Positive | 4612954 - 4613148 | 7363.04 |
| bacterioferritin | FCU55_22765 | Not Available | Positive | 4613220 - 4613696 | 18496.2 |
| type ii secretion system protein m | FCU55_22775 | Not Available | Negative | 4614397 - 4614858 | 17313.9 |
| type ii secretion system protein gspl | FCU55_22780 | Not Available | Negative | 4614855 - 4616018 | 44476.1 |
| general secretion pathway protein gspk | FCU55_22785 | Not Available | Negative | 4616033 - 4617016 | 37468.5 |
| type ii secretion system protein gspj | FCU55_22790 | Not Available | Negative | 4617009 - 4617596 | 22246.6 |
| type ii secretion system protein gspi | FCU55_22795 | Not Available | Negative | 4617589 - 4617966 | 13946.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





