Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate decarboxylase | FCU55_22325 | Not Available | Negative | 4512281 - 4512732 | 17178.5 |
| cytochrome c peroxidase | FCU55_22330 | Not Available | Negative | 4512943 - 4514340 | 51572.4 |
| alpha,alpha-trehalase tref | FCU55_22335 | Not Available | Positive | 4514745 - 4516394 | 63727.1 |
| response regulator transcription factor | FCU55_22340 | Not Available | Negative | 4516445 - 4517047 | 22614.6 |
| lysr family transcriptional regulator | FCU55_22345 | Not Available | Positive | 4517567 - 4518466 | 33321.5 |
| inner membrane protein yhjd | FCU55_22350 | Not Available | Positive | 4518514 - 4519527 | 37888.5 |
| mhs family mfs transporter | FCU55_22355 | Not Available | Positive | 4519920 - 4521242 | 47213.9 |
| asma family protein | FCU55_22360 | Not Available | Negative | 4521421 - 4523481 | 74448.7 |
| cyclic-guanylate-specific phosphodiesterase | FCU55_22365 | Not Available | Negative | 4523551 - 4524318 | 29561.8 |
| sugar kinase | FCU55_22370 | Not Available | Positive | 4524550 - 4525479 | 34013.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





