Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | FCU55_22275 | Not Available | Negative | 4504189 - 4504920 | 27144.6 |
| ribonuclease hi | FCU55_22280 | Not Available | Positive | 4504985 - 4505452 | 17597.0 |
| class i sam-dependent methyltransferase | FCU55_22285 | Not Available | Negative | 4505449 - 4506171 | 27212.7 |
| hydroxyacylglutathione hydrolase | FCU55_22290 | Not Available | Positive | 4506205 - 4506960 | 28506.0 |
| murein transglycosylase d | FCU55_22295 | Not Available | Positive | 4507032 - 4508390 | 49420.3 |
| class i sam-dependent methyltransferase | FCU55_22300 | Not Available | Negative | 4508439 - 4509209 | 28237.3 |
| endonuclease/exonuclease/phosphatase family protein | FCU55_22305 | Not Available | Negative | 4509287 - 4510087 | 29993.4 |
| lysr family transcriptional regulator | FCU55_22310 | Not Available | Positive | 4510328 - 4511242 | 33706.7 |
| 2,5-didehydrogluconate reductase dkgb | FCU55_22315 | Not Available | Negative | 4511239 - 4512042 | 29529.4 |
| Trna-asp | Not Available | Not Available | Positive | 4512205 - 4512281 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





