Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flagellar hook-length control protein flik | FCU55_22020 | Not Available | Negative | 4457948 - 4459009 | 38579.1 |
| flagellar protein flit | FCU55_22025 | Not Available | Negative | 4459006 - 4459317 | 12114.6 |
| flagellar export chaperone flis | FCU55_22030 | Not Available | Negative | 4459322 - 4459714 | 14590.5 |
| flagellar hook protein | FCU55_22035 | Not Available | Negative | 4459737 - 4461053 | 45874.2 |
| lateral flagellin lafa | FCU55_22045 | Not Available | Negative | 4461463 - 4462377 | 31670.6 |
| cadc family transcriptional regulator | FCU55_22050 | Not Available | Positive | 4462863 - 4463705 | 31232.7 |
| flagellar hook-associated protein | FCU55_22055 | Not Available | Negative | 4463764 - 4464741 | 35196.4 |
| flagellar hook-associated protein 3 | FCU55_22060 | Not Available | Negative | 4464758 - 4465687 | 32925.4 |
| flagellar hook-associated protein flgk | FCU55_22065 | Not Available | Negative | 4465702 - 4467078 | 48332.0 |
| rod-binding protein | FCU55_22070 | Not Available | Negative | 4467268 - 4467567 | 11048.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





