Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flavodoxin flda | FCU55_21595 | Not Available | Positive | 4397141 - 4397671 | 19737.9 |
| fur leader peptide | FCU55_21600 | Not Available | Positive | 4397881 - 4397967 | 3108.72 |
| ferric iron uptake transcriptional regulator | FCU55_21605 | Not Available | Positive | 4397960 - 4398406 | 16795.8 |
| hypothetical protein | FCU55_21610 | Not Available | Negative | 4398490 - 4398816 | 12003.3 |
| chitoporin | FCU55_21615 | Not Available | Negative | 4398866 - 4400212 | 50669.1 |
| hypothetical protein | FCU55_21620 | Not Available | Negative | 4400286 - 4400347 | 2293.74 |
| hydrolase | FCU55_21840 | Not Available | Negative | 4431660 - 4432286 | 23089.5 |
| mfs transporter | FCU55_21845 | Not Available | Positive | 4432600 - 4433748 | 41506.3 |
| flia/whig family rna polymerase sigma factor | FCU55_22010 | Not Available | Negative | 4456737 - 4457453 | 27632.2 |
| flagellar basal body-associated flil family protein | FCU55_22015 | Not Available | Negative | 4457473 - 4457940 | 17049.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





