Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome bd-i oxidase subunit cydx | FCU55_21340 | Not Available | Negative | 4340980 - 4341093 | 4041.9 |
| cytochrome d ubiquinol oxidase subunit ii | FCU55_21345 | Not Available | Negative | 4341108 - 4342247 | 42455.6 |
| cytochrome ubiquinol oxidase subunit i | FCU55_21350 | Not Available | Negative | 4342263 - 4343831 | 58208.4 |
| tetratricopeptide repeat protein | FCU55_21360 | Not Available | Negative | 4345374 - 4346567 | 42806.3 |
| mannosylglycerate hydrolase | FCU55_21365 | Not Available | Negative | 4346765 - 4349398 | 100646.0 |
| pts 2-o-a-mannosyl-d-glycerate transporter subunit iiabc | FCU55_21370 | Not Available | Negative | 4349416 - 4351332 | 67262.0 |
| gntr family transcriptional regulator | FCU55_21375 | Not Available | Positive | 4351501 - 4352223 | 28232.8 |
| succinate--coa ligase subunit alpha | FCU55_21380 | Not Available | Negative | 4352327 - 4353196 | 29779.3 |
| adp-forming succinate--coa ligase subunit beta | FCU55_21385 | Not Available | Negative | 4353196 - 4354362 | 41395.1 |
| 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase | FCU55_21390 | Not Available | Negative | 4354456 - 4355673 | 44042.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





