Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease | FCU55_21190 | Not Available | Negative | 4314270 - 4315436 | 44126.0 |
| brnt family toxin | FCU55_21195 | Not Available | Positive | 4315633 - 4315920 | 11157.3 |
| brna antitoxin family protein | FCU55_21200 | Not Available | Positive | 4315907 - 4316209 | 11592.7 |
| gtpase | FCU55_21205 | Not Available | Negative | 4316243 - 4317199 | 35708.9 |
| ybdd/yjix family protein | FCU55_21210 | Not Available | Negative | 4317210 - 4317413 | 7729.24 |
| pyruvate/proton symporter btst | FCU55_21215 | Not Available | Negative | 4317463 - 4319613 | 77314.5 |
| methyl-accepting chemotaxis protein | FCU55_21220 | Not Available | Positive | 4319990 - 4321654 | 59787.9 |
| mfs transporter | FCU55_21225 | Not Available | Negative | 4321703 - 4323064 | 49402.4 |
| gntr family transcriptional regulator | FCU55_21230 | Not Available | Negative | 4323281 - 4324195 | 35434.3 |
| zinc-binding alcohol dehydrogenase family protein | FCU55_21235 | Not Available | Positive | 4324334 - 4325356 | 36407.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





