Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrial biogenesis outer membrane usher protein | FCU55_21035 | Not Available | Positive | 4280611 - 4283247 | 96576.0 |
| type 1 fimbriae minor subunit fimf | FCU55_21040 | Not Available | Positive | 4283257 - 4283787 | 18764.4 |
| type 1 fimbriae minor subunit fimg | FCU55_21045 | Not Available | Positive | 4283800 - 4284303 | 17433.4 |
| type 1 fimbriae d-mannose specific adhesin fimh | FCU55_21050 | Not Available | Positive | 4284323 - 4285225 | 31428.1 |
| gluconate permease gntp | FCU55_21055 | Not Available | Negative | 4285399 - 4286742 | 47141.0 |
| mannonate dehydratase | FCU55_21060 | Not Available | Positive | 4287082 - 4288266 | 44826.5 |
| fructuronate reductase | FCU55_21065 | Not Available | Positive | 4288347 - 4289807 | 53659.3 |
| uxu operon transcriptional regulator | FCU55_21070 | Not Available | Positive | 4290022 - 4290795 | 29291.8 |
| irad leader peptide | FCU55_21080 | Not Available | Positive | 4292314 - 4292397 | 3016.48 |
| anti-adapter protein irad | FCU55_21085 | Not Available | Positive | 4292394 - 4292786 | 14747.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





