Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type i toxin-antitoxin system toxin hokb | FCU55_20925 | Not Available | Positive | 4252408 - 4252557 | 5626.16 |
| hypothetical protein | FCU55_20930 | Not Available | Negative | 4252629 - 4252802 | 5812.15 |
| cytochrome b561 | FCU55_20935 | Not Available | Negative | 4253047 - 4253577 | 20243.7 |
| type i glyceraldehyde-3-phosphate dehydrogenase | FCU55_20940 | Not Available | Positive | 4253766 - 4254767 | 35779.7 |
| aldehyde dehydrogenase | FCU55_20945 | Not Available | Negative | 4254809 - 4256248 | 52298.8 |
| ydcf family protein | FCU55_20950 | Not Available | Negative | 4256458 - 4257258 | 29649.3 |
| atp-dependent rna helicase hrpa | FCU55_20955 | Not Available | Negative | 4257531 - 4261433 | 149019.0 |
| fmn-dependent nadh-azoreductase | FCU55_20960 | Not Available | Positive | 4261634 - 4262239 | 21687.0 |
| pyridoxine 4-dehydrogenase | FCU55_20965 | Not Available | Negative | 4262279 - 4263145 | 30847.9 |
| ents/ybda mfs transporter | FCU55_20970 | Not Available | Negative | 4263365 - 4268488 | 174412.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





