Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| isas1 family transposase | FCU55_20760 | Not Available | Negative | 4221711 - 4222847 | 43142.9 |
| glutathione s-transferase | FCU55_20765 | Not Available | Negative | 4223327 - 4223446 | 4515.53 |
| l-asparagine permease | FCU55_20770 | Not Available | Positive | 4223659 - 4225158 | 54221.3 |
| ynce family protein | FCU55_20775 | Not Available | Negative | 4225271 - 4226332 | 38706.2 |
| tonb-dependent receptor | FCU55_20780 | Not Available | Positive | 4226574 - 4228676 | 77259.0 |
| gntr family transcriptional regulator | FCU55_20785 | Not Available | Negative | 4228714 - 4228950 | 8651.72 |
| l-methionine sulfoximine/l-methionine sulfone acetyltransferase | FCU55_20795 | Not Available | Positive | 4229157 - 4229675 | 19249.7 |
| dmt family transporter | FCU55_20800 | Not Available | Positive | 4229672 - 4230121 | 15790.0 |
| duf2526 domain-containing protein | FCU55_20805 | Not Available | Negative | 4230122 - 4230355 | 8785.44 |
| ghot/ortt family toxin | FCU55_20810 | Not Available | Negative | 4230441 - 4230614 | 6612.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





