Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate dehydrogenase-n subunit alpha | FCU55_20710 | Not Available | Negative | 4206413 - 4209460 | 112722.0 |
| aromatic amino acid dmt transporter yddg | FCU55_20715 | Not Available | Positive | 4209692 - 4210573 | 31574.4 |
| nark family nitrate/nitrite mfs transporter | FCU55_20720 | Not Available | Positive | 4210846 - 4212234 | 49912.1 |
| nitrate reductase subunit alpha | FCU55_20725 | Not Available | Positive | 4212329 - 4216069 | 140225.0 |
| nitrate reductase subunit beta | FCU55_20730 | Not Available | Positive | 4216066 - 4217610 | 58520.0 |
| nitrate reductase molybdenum cofactor assembly chaperone | FCU55_20735 | Not Available | Positive | 4217610 - 4218305 | 26190.2 |
| respiratory nitrate reductase subunit gamma | FCU55_20740 | Not Available | Positive | 4218302 - 4218982 | 25713.2 |
| phzf family isomerase | FCU55_20745 | Not Available | Positive | 4219062 - 4219955 | 32189.4 |
| n-hydroxyarylamine o-acetyltransferase | FCU55_20750 | Not Available | Negative | 4220051 - 4220896 | 32275.6 |
| flavin reductase family protein | FCU55_20755 | Not Available | Positive | 4221071 - 4221640 | 20820.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





