Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna replication terminus site-binding protein | FCU55_20540 | Not Available | Positive | 4169083 - 4170012 | 35825.2 |
| class ii fumarate hydratase | FCU55_20545 | Not Available | Negative | 4170009 - 4171412 | 50434.8 |
| fumarate hydratase | FCU55_20550 | Not Available | Negative | 4171555 - 4173201 | 60248.9 |
| mannose-6-phosphate isomerase | FCU55_20555 | Not Available | Positive | 4173400 - 4174575 | 42768.3 |
| duf945 domain-containing protein | FCU55_20560 | Not Available | Positive | 4174676 - 4176184 | 54668.2 |
| beta-glucuronidase | FCU55_20575 | Not Available | Negative | 4178903 - 4180714 | 68475.7 |
| tetr/acrr family transcriptional regulator | FCU55_20580 | Not Available | Negative | 4181104 - 4181694 | 21800.5 |
| 7-alpha-hydroxysteroid dehydrogenase | FCU55_20585 | Not Available | Negative | 4181923 - 4182690 | 26837.2 |
| mal regulon transcriptional regulator mali | FCU55_20590 | Not Available | Negative | 4182802 - 4183830 | 36608.9 |
| pts maltose transporter subunit iicb | FCU55_20595 | Not Available | Positive | 4184005 - 4185597 | 56707.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





