Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| starvation-sensing protein rspa | FCU55_20380 | Not Available | Negative | 4139603 - 4140817 | 45985.0 |
| ynfa family protein | FCU55_20385 | Not Available | Negative | 4141023 - 4141349 | 11920.2 |
| duf1283 family protein | FCU55_20390 | Not Available | Positive | 4141484 - 4141825 | 13002.5 |
| spermidine n1-acetyltransferase | FCU55_20395 | Not Available | Positive | 4141860 - 4142420 | 21902.3 |
| ynfc family lipoprotein | FCU55_20400 | Not Available | Negative | 4142423 - 4143133 | 26515.3 |
| duf1161 domain-containing protein | FCU55_20405 | Not Available | Positive | 4143241 - 4143546 | 10605.3 |
| dimethyl sulfoxide reductase subunit a | FCU55_20410 | Not Available | Positive | 4143745 - 4146171 | 89519.7 |
| dimethylsulfoxide reductase subunit b | FCU55_20425 | Not Available | Positive | 4147812 - 4148429 | 22752.9 |
| dimethyl sulfoxide reductase anchor subunit | FCU55_20430 | Not Available | Positive | 4148431 - 4149285 | 30544.6 |
| tat proofreading chaperone dmsd | FCU55_20435 | Not Available | Positive | 4149328 - 4149942 | 23349.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





