Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4186 domain-containing protein | FCU55_20270 | Not Available | Negative | 4120091 - 4120450 | 13570.5 |
| glutaminase 2 | FCU55_20275 | Not Available | Negative | 4120450 - 4121376 | 33517.6 |
| succinate-semialdehyde dehydrogenase | FCU55_20280 | Not Available | Negative | 4121440 - 4122828 | 49706.6 |
| lysr family transcriptional regulator | FCU55_20285 | Not Available | Positive | 4122929 - 4123810 | 32418.8 |
| l-arabinose mfs transporter | FCU55_20295 | Not Available | Positive | 4124149 - 4125339 | 42549.9 |
| naat family transporter marc | FCU55_20300 | Not Available | Negative | 4125364 - 4126029 | 23646.8 |
| multiple antibiotic resistance transcriptional regulator marr | FCU55_20305 | Not Available | Positive | 4126241 - 4126675 | 16070.0 |
| mdr efflux pump acrab transcriptional activator mara | FCU55_20310 | Not Available | Positive | 4126696 - 4127079 | 15212.0 |
| multiple antibiotic resistance protein marb | FCU55_20315 | Not Available | Positive | 4127111 - 4127329 | 7570.05 |
| o-acetylserine/cysteine exporter | FCU55_20320 | Not Available | Negative | 4127360 - 4128259 | 32314.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





