Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine(1911/1915/1917) synthase rlud | FCU55_20205 | Not Available | Positive | 4106375 - 4107355 | 37139.8 |
| polyphenol oxidase | FCU55_20210 | Not Available | Positive | 4107352 - 4108083 | 26282.4 |
| atp-dependent chaperone clpb | FCU55_20215 | Not Available | Positive | 4108213 - 4110786 | 95590.8 |
| fimbrial protein | FCU55_20225 | Not Available | Negative | 4111613 - 4112176 | 19113.5 |
| type ii toxin-antitoxin system serine/threonine protein kinase toxin hipa | FCU55_20240 | Not Available | Negative | 4113087 - 4114409 | 49332.7 |
| type ii toxin-antitoxin system antitoxin hipb | FCU55_20245 | Not Available | Negative | 4114409 - 4114675 | 9987.87 |
| trans-aconitate 2-methyltransferase | FCU55_20250 | Not Available | Positive | 4114983 - 4115741 | 29049.5 |
| hypothetical protein | FCU55_20255 | Not Available | Negative | 4115745 - 4116659 | 34839.0 |
| tagaturonate reductase | FCU55_20260 | Not Available | Negative | 4116856 - 4118307 | 54807.4 |
| diguanylate cyclase | FCU55_20265 | Not Available | Negative | 4118534 - 4119952 | 52093.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





