Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf883 domain-containing protein | FCU55_19715 | Not Available | Negative | 4029281 - 4029610 | 11847.9 |
| duf2002 family protein | FCU55_19720 | Not Available | Positive | 4029762 - 4030106 | 13066.5 |
| l-alanine exporter alae | FCU55_19725 | Not Available | Negative | 4030143 - 4030592 | 16950.0 |
| dna-binding protein stpa | FCU55_19730 | Not Available | Positive | 4031260 - 4031664 | 15360.5 |
| thiosulfate sulfurtransferase ygap | FCU55_19735 | Not Available | Negative | 4031711 - 4032235 | 18693.0 |
| helix-turn-helix transcriptional regulator | FCU55_19740 | Not Available | Negative | 4032245 - 4032544 | 10571.0 |
| yqae/pmp3 family membrane protein | FCU55_19745 | Not Available | Positive | 4032727 - 4032885 | 5865.57 |
| potassium binding protein kbp | FCU55_19750 | Not Available | Positive | 4032969 - 4033418 | 16064.0 |
| dna-binding transcriptional regulator csir | FCU55_19755 | Not Available | Negative | 4033419 - 4034081 | 25018.4 |
| gaba permease | FCU55_19760 | Not Available | Negative | 4034102 - 4035502 | 51145.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





