Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 4009828 - 4009904 | Not Available |
| fructose-1-phosphate/6-phosphogluconate phosphatase | FCU55_19620 | Not Available | Positive | 4010185 - 4010751 | 20800.1 |
| deda family protein | FCU55_19625 | Not Available | Positive | 4010748 - 4011176 | 15576.6 |
| glutamate--cysteine ligase | FCU55_19630 | Not Available | Positive | 4011249 - 4012805 | 58272.5 |
| s-ribosylhomocysteine lyase | FCU55_19635 | Not Available | Positive | 4012955 - 4013470 | 19444.4 |
| poly(a) polymerase | FCU55_19640 | Not Available | Negative | 4013521 - 4014633 | 43146.8 |
| 2'-5' rna ligase | FCU55_19645 | Not Available | Negative | 4014630 - 4015337 | 27861.4 |
| multidrug efflux mfs transporter permease subunit emrb | FCU55_19650 | Not Available | Negative | 4015595 - 4017133 | 55609.6 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emra | FCU55_19655 | Not Available | Negative | 4017150 - 4018322 | 42724.5 |
| multidrug efflux transporter emrab transcriptional repressor emrr | FCU55_19660 | Not Available | Negative | 4018449 - 4018979 | 20506.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





