Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2628 domain-containing protein | FCU55_19360 | Not Available | Negative | 3956802 - 3957182 | 14925.2 |
| hypothetical protein | FCU55_19365 | Not Available | Negative | 3957197 - 3957613 | 15930.1 |
| eama family transporter rard | FCU55_19370 | Not Available | Negative | 3957672 - 3958562 | 33297.1 |
| thioesterase family protein | FCU55_19375 | Not Available | Negative | 3958614 - 3959081 | 17163.8 |
| phospholipase a | FCU55_19380 | Not Available | Positive | 3959246 - 3960115 | 33108.7 |
| atp-dependent dna helicase recq | FCU55_19385 | Not Available | Positive | 3960240 - 3962069 | 68298.5 |
| rpn family recombination-promoting nuclease/putative transposase | FCU55_19395 | Not Available | Negative | 3962791 - 3963651 | 33025.1 |
| homoserine/homoserine lactone efflux protein | FCU55_19400 | Not Available | Negative | 3963810 - 3964430 | 22428.2 |
| lysophospholipase l2 | FCU55_19405 | Not Available | Positive | 3964541 - 3965563 | 38954.4 |
| sugar/pyridoxal phosphate phosphatase yigl | FCU55_19410 | Not Available | Positive | 3965571 - 3966371 | 29709.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





