Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-pro | Not Available | Not Available | Positive | 3935665 - 3935741 | Not Available |
| anaerobic sulfatase maturase | FCU55_19265 | Not Available | Positive | 3935888 - 3937123 | 46471.7 |
| arylsulfatase | FCU55_19270 | Not Available | Negative | 3937214 - 3938869 | 60674.9 |
| hypothetical protein | FCU55_19275 | Not Available | Negative | 3939499 - 3940089 | 22366.3 |
| protoheme ix biogenesis protein hemy | FCU55_19280 | Not Available | Negative | 3940139 - 3941335 | 45247.7 |
| uroporphyrinogen-iii c-methyltransferase | FCU55_19285 | Not Available | Negative | 3941338 - 3942549 | 43791.3 |
| uroporphyrinogen-iii synthase | FCU55_19290 | Not Available | Negative | 3942571 - 3943311 | 27751.5 |
| hydroxymethylbilane synthase | FCU55_19295 | Not Available | Negative | 3943308 - 3944249 | 33822.9 |
| class i adenylate cyclase | FCU55_19300 | Not Available | Positive | 3944636 - 3947182 | 97548.3 |
| iron donor protein cyay | FCU55_19305 | Not Available | Negative | 3947222 - 3947542 | 12232.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





