Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FCU55_18710 | Not Available | Negative | 3825858 - 3826607 | 28082.6 |
| siderophore yersiniabactin receptor fyua | FCU55_18715 | Not Available | Negative | 3827257 - 3829278 | 73786.2 |
| yersiniabactin biosynthesis salycil-amp ligase ybte | FCU55_18720 | Not Available | Negative | 3829409 - 3830986 | 57202.5 |
| yersiniabactin biosynthesis thioesterase ybtt | FCU55_18725 | Not Available | Negative | 3830990 - 3831793 | 29854.5 |
| yersiniabactin biosynthesis oxidoreductase ybtu | FCU55_18730 | Not Available | Negative | 3831790 - 3832890 | 40946.2 |
| yersiniabactin polyketide synthase hmwp1 | FCU55_18735 | Not Available | Negative | 3832887 - 3842378 | 348870.0 |
| yersiniabactin non-ribosomal peptide synthetase hmwp2 | FCU55_18740 | Not Available | Negative | 3842466 - 3848573 | 228709.0 |
| yersiniabactin transcriptional regulator ybta | FCU55_18745 | Not Available | Negative | 3848764 - 3849723 | 35849.0 |
| yersiniabactin abc transporter atp-binding/permease protein ybtp | FCU55_18750 | Not Available | Positive | 3849890 - 3851692 | 66349.0 |
| yersiniabactin abc transporter atp-binding/permease protein ybtq | FCU55_18755 | Not Available | Positive | 3851679 - 3853481 | 66424.3 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





