Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| leucine--trna ligase | FCU55_18125 | Not Available | Positive | 3711312 - 3713894 | 97240.0 |
| lps assembly lipoprotein lpte | FCU55_18130 | Not Available | Positive | 3713909 - 3714490 | 21357.8 |
| dna polymerase iii subunit delta | FCU55_18135 | Not Available | Positive | 3714490 - 3715521 | 38732.0 |
| nicotinate-nucleotide adenylyltransferase | FCU55_18140 | Not Available | Positive | 3715523 - 3716164 | 24561.4 |
| adenosylcobalamin/alpha-ribazole phosphatase | FCU55_18145 | Not Available | Positive | 3716188 - 3716799 | 23409.8 |
| ribosome silencing factor | FCU55_18150 | Not Available | Positive | 3717059 - 3717376 | 11582.9 |
| 23s rrna (pseudouridine(1915)-n(3))-methyltransferase rlmh | FCU55_18155 | Not Available | Positive | 3717380 - 3717847 | 17342.1 |
| peptidoglycan dd-transpeptidase mrda | FCU55_18160 | Not Available | Positive | 3717878 - 3719779 | 70860.6 |
| peptidoglycan glycosyltransferase mrdb | FCU55_18165 | Not Available | Positive | 3719782 - 3720894 | 40492.6 |
| endolytic peptidoglycan transglycosylase rlpa | FCU55_18170 | Not Available | Positive | 3720905 - 3721993 | 37554.1 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





