Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutamate/aspartate abc transporter permease gltj | FCU55_18075 | Not Available | Positive | 3702233 - 3702973 | 27504.3 |
| glutamate abc transporter permease | FCU55_18080 | Not Available | Positive | 3702973 - 3703647 | 24916.2 |
| glutamate/aspartate abc transporter atp binding protein gltl | FCU55_18085 | Not Available | Positive | 3703647 - 3704372 | 26674.7 |
| pyrimidine-specific ribonucleoside hydrolase riha | FCU55_18090 | Not Available | Positive | 3704490 - 3705425 | 33823.9 |
| molecular chaperone hscc | FCU55_18095 | Not Available | Positive | 3705509 - 3707179 | 62028.9 |
| co-chaperone djlc | FCU55_18100 | Not Available | Negative | 3707239 - 3708690 | 55866.2 |
| duf1266 domain-containing protein | FCU55_18105 | Not Available | Negative | 3708687 - 3709394 | 27019.8 |
| sel1 repeat family protein | FCU55_18110 | Not Available | Positive | 3709496 - 3710050 | 20847.8 |
| sel1 repeat family protein | FCU55_18115 | Not Available | Positive | 3710127 - 3710345 | 7775.03 |
| zinc ribbon-containing protein | FCU55_18120 | Not Available | Negative | 3710595 - 3711077 | 18798.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





