Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-gln | Not Available | Not Available | Positive | 3691535 - 3691609 | Not Available |
| 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase | FCU55_18030 | Not Available | Negative | 3691764 - 3692939 | 42974.1 |
| trna (n6-isopentenyl adenosine(37)-c2)-methylthiotransferase miab | FCU55_18035 | Not Available | Positive | 3693085 - 3694509 | 53666.0 |
| phoh family protein | FCU55_18040 | Not Available | Positive | 3694623 - 3695702 | 40656.9 |
| rrna maturation rnase ybey | FCU55_18045 | Not Available | Positive | 3695699 - 3696166 | 17526.6 |
| magnesium/cobalt transporter corc | FCU55_18050 | Not Available | Positive | 3696256 - 3697134 | 33300.4 |
| apolipoprotein n-acyltransferase | FCU55_18055 | Not Available | Positive | 3697159 - 3698697 | 57098.2 |
| hypothetical protein | FCU55_18060 | Not Available | Negative | 3698694 - 3698888 | 7539.28 |
| rhomboid family intramembrane serine protease | FCU55_18065 | Not Available | Negative | 3698824 - 3700701 | 67584.7 |
| glutamate/aspartate abc transporter substrate-binding protein glti | FCU55_18070 | Not Available | Positive | 3701155 - 3702063 | 33362.9 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





