Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Tail e family protein | FCU55_23660 | Not Available | Negative | 4765763 - 4766137 | 13496.1 |
| Major tail tube protein | FCU55_23665 | Not Available | Negative | 4766193 - 4766705 | 18795.4 |
| Tail sheath family protein | FCU55_23670 | Not Available | Negative | 4766705 - 4767889 | 43462.4 |
| Bacteriop2 gpd protein | FCU55_23675 | Not Available | Positive | 4768047 - 4769156 | 41194.8 |
| Ogr/delta-like zinc finger family protein | FCU55_23680 | Not Available | Positive | 4769197 - 4769457 | 9654.3 |
| Hok/gef family protein | FCU55_23685 | Not Available | Positive | 4769649 - 4769789 | 5226.58 |
| Gp287 | FCU55_23690 | Not Available | Negative | 4770095 - 4771387 | 48416.8 |
| Gp70 | FCU55_23695 | Not Available | Negative | 4771478 - 4772821 | 49656.9 |
| outer membrane lipoprotein chaperone lola | FCU55_23700 | Not Available | Negative | 4772832 - 4773443 | 22498.2 |
| Gp201 | FCU55_23705 | Not Available | Negative | 4773602 - 4777708 | 151110.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





