Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcriptional regulator tyrr | FCU55_17705 | Not Available | Positive | 3631821 - 3633362 | 57657.5 |
| thiol peroxidase | FCU55_17710 | Not Available | Negative | 3633406 - 3633912 | 17836.3 |
| l-ala-d/l-glu epimerase | FCU55_17715 | Not Available | Positive | 3634031 - 3634996 | 34719.1 |
| murein tripeptide amidase mpaa | FCU55_17720 | Not Available | Negative | 3634971 - 3635699 | 26554.3 |
| sdr family oxidoreductase | FCU55_17725 | Not Available | Negative | 3635990 - 3636628 | 23339.2 |
| hypothetical protein | FCU55_17730 | Not Available | Negative | 3636625 - 3636699 | 2735.34 |
| alpha/beta hydrolase | FCU55_17735 | Not Available | Negative | 3636699 - 3637619 | 33647.3 |
| lysr family transcriptional regulator | FCU55_17740 | Not Available | Positive | 3637757 - 3638656 | 33467.8 |
| peptide abc transporter substrate-binding protein | FCU55_17745 | Not Available | Positive | 3638993 - 3640606 | 59933.3 |
| low conductance mechanosensitive channel ynai | FCU55_17750 | Not Available | Negative | 3640657 - 3641688 | 38743.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





