Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trp operon leader peptide | FCU55_17390 | Not Available | Negative | 3568303 - 3568347 | 1723.19 |
| 5'-3' exoribonuclease | FCU55_17395 | Not Available | Positive | 3568485 - 3569366 | 32599.8 |
| threonylcarbamoyl-amp synthase | FCU55_17400 | Not Available | Positive | 3569363 - 3569983 | 23213.2 |
| duf2207 domain-containing protein | FCU55_17405 | Not Available | Positive | 3570011 - 3571906 | 71212.3 |
| 23s rrna pseudouridine(2605) synthase rlub | FCU55_17410 | Not Available | Positive | 3572119 - 3572994 | 32727.4 |
| hypothetical protein | FCU55_17415 | Not Available | Positive | 3573200 - 3574186 | 36654.4 |
| hypothetical protein | FCU55_17420 | Not Available | Positive | 3574196 - 3574504 | 11588.9 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | FCU55_17425 | Not Available | Negative | 3574561 - 3575151 | 22014.2 |
| ycik family oxidoreductase | FCU55_17430 | Not Available | Negative | 3575148 - 3575906 | 27936.5 |
| protease sohb | FCU55_17435 | Not Available | Positive | 3576126 - 3577175 | 39410.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





