Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | FCU55_17070 | Not Available | Positive | 3515888 - 3517165 | 46815.7 |
| hipa domain-containing protein | FCU55_17075 | Not Available | Negative | 3517308 - 3518069 | 28247.8 |
| toxin hipa | FCU55_17080 | Not Available | Negative | 3518069 - 3518575 | 19513.0 |
| helix-turn-helix domain-containing protein | FCU55_17085 | Not Available | Negative | 3518578 - 3519069 | 17630.4 |
| hypothetical protein | FCU55_17090 | Not Available | Positive | 3519163 - 3519360 | 7773.51 |
| 50s ribosomal protein l9 | FCU55_17095 | Not Available | Negative | 3519471 - 3519920 | 15770.0 |
| 30s ribosomal protein s18 | FCU55_17100 | Not Available | Negative | 3519962 - 3520189 | 8986.94 |
| primosomal replication protein n | FCU55_17105 | Not Available | Negative | 3520194 - 3520508 | 11472.9 |
| 30s ribosomal protein s6 | FCU55_17110 | Not Available | Negative | 3520515 - 3520910 | 15187.9 |
| duf1471 domain-containing protein | FCU55_17115 | Not Available | Positive | 3521238 - 3521513 | 10149.9 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





