Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hth-type transcriptional regulator trer | FCU55_16870 | Not Available | Positive | 3470950 - 3471897 | 34575.8 |
| pts trehalose transporter subunit iibc | FCU55_16875 | Not Available | Positive | 3472016 - 3473437 | 51132.0 |
| alpha,alpha-phosphotrehalase | FCU55_16880 | Not Available | Positive | 3473487 - 3475142 | 63877.1 |
| anaerobic ribonucleoside-triphosphate reductase | FCU55_16885 | Not Available | Positive | 3475536 - 3477674 | 79999.9 |
| anaerobic ribonucleoside-triphosphate reductase-activating protein | FCU55_16890 | Not Available | Positive | 3477833 - 3478297 | 17450.9 |
| cytochrome b562 | FCU55_16895 | Not Available | Negative | 3478342 - 3478728 | 14061.7 |
| metalloprotease pmba | FCU55_16900 | Not Available | Negative | 3478911 - 3480263 | 48372.4 |
| ribosome-associated protein | FCU55_16905 | Not Available | Positive | 3480357 - 3480908 | 21360.5 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | FCU55_16910 | Not Available | Negative | 3481059 - 3482432 | 49882.0 |
| class 1 fructose-bisphosphatase | FCU55_16915 | Not Available | Positive | 3482608 - 3483606 | 36836.0 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





