Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hslu--hslv peptidase atpase subunit | FCU55_16475 | Not Available | Negative | 3384415 - 3385746 | 49583.7 |
| atp-dependent protease subunit hslv | FCU55_16480 | Not Available | Negative | 3385756 - 3386286 | 19094.0 |
| cell division protein ftsn | FCU55_16485 | Not Available | Negative | 3386379 - 3387338 | 35809.3 |
| dna-binding transcriptional regulator cytr | FCU55_16490 | Not Available | Negative | 3387430 - 3388455 | 37850.1 |
| primosomal protein n' | FCU55_16495 | Not Available | Negative | 3388611 - 3390809 | 81674.6 |
| 50s ribosomal protein l31 | FCU55_16500 | Not Available | Positive | 3391012 - 3391224 | 7871.49 |
| yiix family permuted papain-like enzyme | FCU55_16505 | Not Available | Negative | 3391285 - 3391893 | 23132.8 |
| met regulon transcriptional regulator metj | FCU55_16510 | Not Available | Negative | 3391953 - 3392270 | 12141.4 |
| cystathionine gamma-synthase | FCU55_16515 | Not Available | Positive | 3392547 - 3393707 | 41582.9 |
| bifunctional aspartate kinase/homoserine dehydrogenase ii | FCU55_16520 | Not Available | Positive | 3393710 - 3396142 | 88935.8 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





