Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf805 domain-containing protein | FCU55_16425 | Not Available | Positive | 3376278 - 3376718 | 16556.6 |
| duf406 domain-containing protein | FCU55_16430 | Not Available | Positive | 3376930 - 3377229 | 10746.7 |
| universal stress protein uspd | FCU55_16435 | Not Available | Positive | 3377256 - 3377684 | 16276.0 |
| ferredoxin--nadp(+) reductase | FCU55_16440 | Not Available | Negative | 3377689 - 3378435 | 27732.5 |
| class ii fructose-bisphosphatase | FCU55_16445 | Not Available | Negative | 3378532 - 3379542 | 35854.6 |
| glycerol kinase glpk | FCU55_16450 | Not Available | Negative | 3379713 - 3381221 | 56293.0 |
| glycerol uptake facilitator protein glpf | FCU55_16455 | Not Available | Negative | 3381244 - 3382089 | 29781.7 |
| septal ring assembly protein zapb | FCU55_16460 | Not Available | Positive | 3382514 - 3382759 | 9635.4 |
| ribonuclease e activity regulator rraa | FCU55_16465 | Not Available | Negative | 3382844 - 3383329 | 17361.4 |
| 1,4-dihydroxy-2-naphthoate polyprenyltransferase | FCU55_16470 | Not Available | Negative | 3383422 - 3384348 | 33538.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





