Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 6-n-hydroxylaminopurine resistance protein | FCU55_16375 | Not Available | Positive | 3366720 - 3367394 | 25339.1 |
| envelope stress sensor histidine kinase cpxa | FCU55_16380 | Not Available | Negative | 3367565 - 3368938 | 51627.3 |
| envelope stress response regulator transcription factor cpxr | FCU55_16385 | Not Available | Negative | 3368935 - 3369633 | 26315.7 |
| cell-envelope stress modulator cpxp | FCU55_16390 | Not Available | Positive | 3369783 - 3370283 | 18966.4 |
| cation-efflux pump fief | FCU55_16395 | Not Available | Positive | 3370432 - 3371334 | 32915.2 |
| 6-phosphofructokinase | FCU55_16400 | Not Available | Positive | 3371515 - 3372477 | 34844.2 |
| sulfate abc transporter substrate-binding protein | FCU55_16405 | Not Available | Positive | 3372797 - 3373786 | 36703.3 |
| cdp-diacylglycerol diphosphatase | FCU55_16410 | Not Available | Positive | 3373893 - 3374648 | 28480.3 |
| triose-phosphate isomerase | FCU55_16415 | Not Available | Negative | 3374703 - 3375470 | 26973.3 |
| duf1454 family protein | FCU55_16420 | Not Available | Negative | 3375578 - 3376177 | 21626.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





