Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nitric oxide reductase transcriptional regulator norr | FCU55_16010 | Not Available | Positive | 3297523 - 3299037 | 55189.6 |
| arabinose-5-phosphate isomerase gutq | FCU55_16015 | Not Available | Negative | 3299034 - 3299999 | 34129.7 |
| glucitol operon dna-binding transcriptional repressor srlr | FCU55_16020 | Not Available | Negative | 3299992 - 3300765 | 28207.8 |
| transcriptional regulator gutm | FCU55_16025 | Not Available | Negative | 3300832 - 3301191 | 12954.0 |
| sorbitol-6-phosphate dehydrogenase | FCU55_16030 | Not Available | Negative | 3301297 - 3302076 | 27813.4 |
| pts glucitol/sorbitol transporter subunit iia | FCU55_16035 | Not Available | Negative | 3302080 - 3302451 | 13307.8 |
| pts glucitol/sorbitol transporter subunit iib | FCU55_16040 | Not Available | Negative | 3302462 - 3303421 | 33338.1 |
| pts glucitol/sorbitol transporter subunit iic | FCU55_16045 | Not Available | Negative | 3303418 - 3303981 | 20600.6 |
| lytic murein transglycosylase b | FCU55_16050 | Not Available | Positive | 3304238 - 3305323 | 40290.0 |
| hypothetical protein | FCU55_16055 | Not Available | Negative | 3305362 - 3305601 | 8681.87 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





