Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| formate hydrogenlyase subunit hycg | FCU55_15955 | Not Available | Positive | 3288367 - 3289134 | 28025.8 |
| formate hydrogenlyase maturation protein hych | FCU55_15960 | Not Available | Positive | 3289131 - 3289541 | 15451.5 |
| hydrogenase maturation peptidase hyci | FCU55_15965 | Not Available | Positive | 3289534 - 3290001 | 16884.4 |
| hypothetical protein | FCU55_15970 | Not Available | Positive | 3290026 - 3290211 | 6940.52 |
| helix-turn-helix domain-containing protein | FCU55_15975 | Not Available | Positive | 3290237 - 3290656 | 15417.2 |
| hypothetical protein | FCU55_15980 | Not Available | Negative | 3290748 - 3291185 | 16611.5 |
| electron transport protein hydn | FCU55_15990 | Not Available | Positive | 3291613 - 3292140 | 19027.2 |
| carbamoyltransferase hypf | FCU55_15995 | Not Available | Positive | 3292293 - 3294545 | 81747.4 |
| nadh:flavorubredoxin reductase norw | FCU55_16000 | Not Available | Negative | 3294767 - 3295900 | 41347.1 |
| anaerobic nitric oxide reductase flavorubredoxin | FCU55_16005 | Not Available | Negative | 3295897 - 3297336 | 54194.0 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





