Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| four-carbon acid sugar kinase family protein | FCU55_15855 | Not Available | Negative | 3268515 - 3269777 | 44906.6 |
| nad(p)-dependent oxidoreductase | FCU55_15860 | Not Available | Negative | 3269774 - 3270682 | 30719.1 |
| deor/glpr transcriptional regulator | FCU55_15865 | Not Available | Positive | 3270878 - 3271645 | 27472.4 |
| protein-serine/threonine phosphatase | FCU55_15870 | Not Available | Negative | 3271696 - 3272352 | 25101.7 |
| dna mismatch repair protein muts | FCU55_15875 | Not Available | Negative | 3272458 - 3275019 | 95338.6 |
| nitrous oxide-stimulated promoter family protein | FCU55_15880 | Not Available | Positive | 3275305 - 3275649 | 13549.8 |
| transporter | FCU55_15885 | Not Available | Negative | 3275688 - 3276116 | 14508.6 |
| formate hydrogenlyase transcriptional activator flha | FCU55_15890 | Not Available | Negative | 3276161 - 3278239 | 78456.5 |
| hydrogenase maturation carbamoyl dehydratase hype | FCU55_15895 | Not Available | Negative | 3278313 - 3279323 | 35036.5 |
| hydrogenase formation protein hypd | FCU55_15900 | Not Available | Negative | 3279320 - 3280441 | 41366.7 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





