Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dmso reductase anchor subunit c | FCU55_21835 | Not Available | Positive | 4430761 - 4431624 | 30827.2 |
| Attr | Not Available | Not Available | Positive | 4433429 - 4433441 | Not Available |
| Attl | Not Available | Not Available | Positive | 4425501 - 4425513 | Not Available |
| Anaerobic ribonucleoside-triphosphate reductase-activating protein | FCU55_21850 | Not Available | Negative | 4433845 - 4434642 | 30070.0 |
| Integrase | FCU55_21855 | Not Available | Negative | 4434674 - 4435669 | 37934.0 |
| C protein | FCU55_21860 | Not Available | Negative | 4435763 - 4436062 | 11400.7 |
| Ribosomal protein s15p/s13e | FCU55_21865 | Not Available | Positive | 4436167 - 4436523 | 13215.7 |
| Replication gene b protein | FCU55_21870 | Not Available | Positive | 4436701 - 4437201 | 19955.1 |
| Hypothetical protein | FCU55_21875 | Not Available | Positive | 4437265 - 4437489 | 8326.94 |
| Gp81 | FCU55_21880 | Not Available | Positive | 4437489 - 4437791 | 11312.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





