Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp phosphoribosyltransferase | FCU55_15310 | Not Available | Negative | 3170025 - 3170924 | 33368.8 |
| his operon leader peptide | FCU55_15315 | Not Available | Negative | 3171070 - 3171120 | 2081.43 |
| yoeb-yefm toxin-antitoxin system antitoxin yefm | FCU55_15325 | Not Available | Positive | 3171403 - 3171654 | 9366.16 |
| txe/yoeb family addiction module toxin | FCU55_15330 | Not Available | Positive | 3171651 - 3171905 | 10143.1 |
| sdr family oxidoreductase | FCU55_15335 | Not Available | Positive | 3171988 - 3172812 | 29681.7 |
| lysr family transcriptional regulator | FCU55_15340 | Not Available | Positive | 3172858 - 3173787 | 34186.0 |
| membrane protein yoei | FCU55_15345 | Not Available | Positive | 3174002 - 3174064 | 2241.66 |
| putrescine/proton symporter plap | FCU55_15350 | Not Available | Positive | 3174054 - 3175412 | 49554.6 |
| is200/is605 family transposase | FCU55_15355 | Not Available | Positive | 3175629 - 3176087 | 17974.9 |
| exodeoxyribonuclease i | FCU55_15370 | Not Available | Negative | 3176198 - 3177625 | 54440.6 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





