Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dtdp-4-dehydrorhamnose reductase | FCU55_15210 | Not Available | Positive | 3150099 - 3150998 | 32648.8 |
| glucose-1-phosphate thymidylyltransferase rfba | FCU55_15215 | Not Available | Positive | 3151056 - 3151934 | 32483.2 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | FCU55_15220 | Not Available | Positive | 3151939 - 3152481 | 20645.6 |
| flippase | FCU55_15225 | Not Available | Positive | 3152483 - 3153742 | 46965.3 |
| glycosyltransferase family 2 protein | FCU55_15230 | Not Available | Positive | 3153747 - 3154712 | 37109.6 |
| glycosyltransferase family 4 protein | FCU55_15235 | Not Available | Positive | 3154775 - 3155923 | 44059.5 |
| hypothetical protein | FCU55_15240 | Not Available | Positive | 3155895 - 3157112 | 46450.6 |
| acetyltransferase | FCU55_15245 | Not Available | Positive | 3157183 - 3157788 | 22224.4 |
| glycosyltransferase family 1 protein | FCU55_15250 | Not Available | Positive | 3157773 - 3158873 | 43310.3 |
| glycosyltransferase family 2 protein | FCU55_15255 | Not Available | Positive | 3158875 - 3159666 | 31089.8 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





