Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protein kinase yegi | FCU55_15060 | Not Available | Positive | 3110615 - 3112555 | 71274.4 |
| molecular chaperone | FCU55_15065 | Not Available | Negative | 3112568 - 3113920 | 49330.1 |
| dna-3-methyladenine glycosylase 2 | FCU55_15070 | Not Available | Positive | 3114054 - 3114902 | 31367.0 |
| diguanylate cyclase | FCU55_15075 | Not Available | Negative | 3115009 - 3118326 | 123962.0 |
| uridine kinase | FCU55_15080 | Not Available | Positive | 3118644 - 3119285 | 24354.6 |
| dctp deaminase | FCU55_15085 | Not Available | Positive | 3119377 - 3119958 | 21222.4 |
| outer membrane assembly protein asma | FCU55_15090 | Not Available | Positive | 3119980 - 3121833 | 68966.9 |
| terc family protein | FCU55_15095 | Not Available | Negative | 3122285 - 3123868 | 59439.9 |
| polysaccharide export protein | FCU55_15100 | Not Available | Positive | 3124528 - 3125667 | 41924.4 |
| low molecular weight protein-tyrosine-phosphatase wzb | FCU55_15105 | Not Available | Positive | 3125673 - 3126116 | 16661.2 |
Pathways
1297 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





