Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain SIEC109 118_NODE_121 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
1311805 bp
Thymine Count
1311896 bp
Guanine Count
1349242 bp
Cytosine Count
1350124 bp
Genome Length
5323067 bp
Protein-coding Genes
4778 genes
Non-Coding Genes
460 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| two-component system response regulator baer | FCU55_15010 | Not Available | Negative | 3097338 - 3098060 | 27657.5 |
| two-component system sensor histidine kinase baes | FCU55_15015 | Not Available | Negative | 3098057 - 3099460 | 52115.5 |
| mfs transporter | FCU55_15020 | Not Available | Negative | 3099457 - 3100872 | 50838.1 |
| multidrug efflux rnd transporter permease subunit mdtc | FCU55_15025 | Not Available | Negative | 3100873 - 3103950 | 110963.0 |
| multidrug efflux rnd transporter permease subunit mdtb | FCU55_15030 | Not Available | Negative | 3103951 - 3107073 | 112088.0 |
| multidrug efflux rnd transporter subunit mdta | FCU55_15035 | Not Available | Negative | 3107073 - 3108320 | 44392.7 |
| type i toxin-antitoxin system ibs family toxin | FCU55_15040 | Not Available | Positive | 3108599 - 3108655 | 2136.9 |
| type i toxin-antitoxin system ibs family toxin | FCU55_15045 | Not Available | Positive | 3108927 - 3108983 | 2079.86 |
| vwa domain-containing protein | FCU55_15050 | Not Available | Positive | 3109201 - 3109860 | 24182.9 |
| protein-serine/threonine phosphatase pphc | FCU55_15055 | Not Available | Positive | 3109857 - 3110618 | 27219.5 |
Pathways
1427 pathways
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





